@ build-started /gnu/store/gpmg1jnb18zjqqj7d218qs6khaxbdjrg-r-stringdist-0.9.5.3.drv - x86_64-linux /var/log/guix/drvs/gp//mg1jnb18zjqqj7d218qs6khaxbdjrg-r-stringdist-0.9.5.3.drv.bz2 13512 starting phase `set-SOURCE-DATE-EPOCH' phase `set-SOURCE-DATE-EPOCH' succeeded after 0.0 seconds starting phase `set-paths' environment variable `PATH' set to `/gnu/store/gd6sm42b6fr1qgyp6p1zp3z4aavxwyk2-r-minimal-3.6.1/bin:/gnu/store/cnqpra8vr2l5fz00rr4yj4bp3hr00cfw-tar-1.32/bin:/gnu/store/py3k9zla9fj3z7430v4crqj5pyrsd3qj-gzip-1.10/bin:/gnu/store/l86azr7r3p5631wj3kk329jl1y1mpjgy-bzip2-1.0.6/bin:/gnu/store/lbip9isk25isymvnb159l115xnacb5j8-xz-5.2.4/bin:/gnu/store/6jdshxwdrad9mlhcqc9k0g24yw45rqf1-file-5.33/bin:/gnu/store/58sq8iabw3jkv0fvf95hd7sq2g4xcsnz-diffutils-3.7/bin:/gnu/store/v76scv4n63ip08g119rczh2mrw31zwpd-patch-2.7.6/bin:/gnu/store/g9d3wv1d68iflx57yp3mcp3k3sv8spsl-findutils-4.6.0/bin:/gnu/store/2z9hsww76aag37p40671l9niq5pvvasx-gawk-5.0.1/bin:/gnu/store/afmvfw1yhfal48n1kjq6bk6kcw8sc3db-sed-4.7/bin:/gnu/store/7iyvxhp2g3v3655zqwr6biz2h0lqv7pr-grep-3.3/bin:/gnu/store/9kzrrccpzl6i1sfwb0drb00gi2gwk0x0-coreutils-8.31/bin:/gnu/store/b5vpfzkr59bpgcsg1k9vvad9h5rwvpgk-make-4.2.1/bin:/gnu/store/29jhbbg1hf557x8j53f9sxd9imlmf02a-bash-minimal-5.0.7/bin:/gnu/store/nc5vlidpxbvngalng30nif8nb3j7gfy2-ld-wrapper-0/bin:/gnu/store/3hkdiscs4910r75njbrql10znxxn7chk-binutils-2.32/bin:/gnu/store/x3jx25cd3q363mr7nbgzrhrv1vza6cf7-gcc-7.4.0/bin:/gnu/store/ahqgl4h89xqj695lgqvsaf6zh2nhy4pj-glibc-2.29/bin:/gnu/store/ahqgl4h89xqj695lgqvsaf6zh2nhy4pj-glibc-2.29/sbin' environment variable `R_LIBS_SITE' unset environment variable `BASH_LOADABLES_PATH' unset environment variable `CPATH' set to `/gnu/store/l86azr7r3p5631wj3kk329jl1y1mpjgy-bzip2-1.0.6/include:/gnu/store/lbip9isk25isymvnb159l115xnacb5j8-xz-5.2.4/include:/gnu/store/6jdshxwdrad9mlhcqc9k0g24yw45rqf1-file-5.33/include:/gnu/store/2z9hsww76aag37p40671l9niq5pvvasx-gawk-5.0.1/include:/gnu/store/b5vpfzkr59bpgcsg1k9vvad9h5rwvpgk-make-4.2.1/include:/gnu/store/3hkdiscs4910r75njbrql10znxxn7chk-binutils-2.32/include:/gnu/store/x3jx25cd3q363mr7nbgzrhrv1vza6cf7-gcc-7.4.0/include:/gnu/store/ahqgl4h89xqj695lgqvsaf6zh2nhy4pj-glibc-2.29/include:/gnu/store/7czrqpi0kwazras6pgyx0bhdn89pg0jl-linux-libre-headers-4.19.56/include' environment variable `LIBRARY_PATH' set to `/gnu/store/gd6sm42b6fr1qgyp6p1zp3z4aavxwyk2-r-minimal-3.6.1/lib:/gnu/store/l86azr7r3p5631wj3kk329jl1y1mpjgy-bzip2-1.0.6/lib:/gnu/store/lbip9isk25isymvnb159l115xnacb5j8-xz-5.2.4/lib:/gnu/store/6jdshxwdrad9mlhcqc9k0g24yw45rqf1-file-5.33/lib:/gnu/store/2z9hsww76aag37p40671l9niq5pvvasx-gawk-5.0.1/lib:/gnu/store/3hkdiscs4910r75njbrql10znxxn7chk-binutils-2.32/lib:/gnu/store/ahqgl4h89xqj695lgqvsaf6zh2nhy4pj-glibc-2.29/lib:/gnu/store/qky1x5bb2jygy58bn6y95ygfsmpakf52-glibc-2.29-static/lib:/gnu/store/mmqp1xqffn6qw6v88i627c2bpbq36fcy-glibc-utf8-locales-2.29/lib' environment variable `GUIX_LOCPATH' set to `/gnu/store/mmqp1xqffn6qw6v88i627c2bpbq36fcy-glibc-utf8-locales-2.29/lib/locale' phase `set-paths' succeeded after 0.0 seconds starting phase `install-locale' using 'en_US.utf8' locale for category "LC_ALL" phase `install-locale' succeeded after 0.0 seconds starting phase `unpack' stringdist/ stringdist/NAMESPACE stringdist/man/ stringdist/man/stringdist-encoding.Rd stringdist/man/seq_amatch.Rd stringdist/man/stringdist-package.Rd stringdist/man/seq_sim.Rd stringdist/man/seq_dist.Rd stringdist/man/qgrams.Rd stringdist/man/stringdist.Rd stringdist/man/phonetic.Rd stringdist/man/stringsim.Rd stringdist/man/amatch.Rd stringdist/man/stringdist-parallelization.Rd stringdist/man/stringdist-api.Rd stringdist/man/seq_qgrams.Rd stringdist/man/stringdist-metrics.Rd stringdist/man/printable_ascii.Rd stringdist/DESCRIPTION stringdist/build/ stringdist/build/vignette.rds stringdist/tests/ stringdist/tests/tinytest.R stringdist/src/ stringdist/src/lv.c stringdist/src/lcs.c stringdist/src/jaro.c stringdist/src/utils.c stringdist/src/stringdist.h stringdist/src/qtree.h stringdist/src/Rstringdist.c stringdist/src/utils.h stringdist/src/Makevars stringdist/src/utf8ToInt.c stringdist/src/Makevars.win stringdist/src/soundex.c stringdist/src/osa.c stringdist/src/R_register_native.c stringdist/src/dictionary.h stringdist/src/stringdist.c stringdist/src/qgram.c stringdist/src/hamming.c stringdist/src/dl.c stringdist/src/dist.h stringdist/vignettes/ stringdist/vignettes/stringdist_api.pdf stringdist/vignettes/loo2014stringdist.pdf stringdist/vignettes/RJournal_6_111-122-2014.Rnw stringdist/vignettes/stringdist_C-Cpp_api.Rnw stringdist/NEWS stringdist/R/ stringdist/R/stringdist.R stringdist/R/amatch.R stringdist/R/utils.R stringdist/R/doc_parallel.R stringdist/R/doc_metrics.R stringdist/R/qgrams.R stringdist/R/doc_encoding.R stringdist/R/phonetic.R stringdist/R/seqdist.R stringdist/R/stringsim.R stringdist/R/doc_api.R stringdist/MD5 stringdist/inst/ stringdist/inst/doc/ stringdist/inst/doc/RJournal_6_111-122-2014.pdf stringdist/inst/doc/RJournal_6_111-122-2014.Rnw stringdist/inst/doc/stringdist_C-Cpp_api.pdf stringdist/inst/doc/stringdist_C-Cpp_api.Rnw stringdist/inst/include/ stringdist/inst/include/stringdist_api.h stringdist/inst/include/Doxyfile stringdist/inst/CITATION stringdist/inst/tinytest/ stringdist/inst/tinytest/test_stringsim.R stringdist/inst/tinytest/test_stringdist.R stringdist/inst/tinytest/test_amatch.R stringdist/inst/tinytest/test_seq_dist.R stringdist/inst/tinytest/test_qgrams.R stringdist/inst/tinytest/test_gh_issue_59.R stringdist/inst/tinytest/test_phonetic.R phase `unpack' succeeded after 0.0 seconds starting phase `patch-usr-bin-file' phase `patch-usr-bin-file' succeeded after 0.0 seconds starting phase `patch-source-shebangs' phase `patch-source-shebangs' succeeded after 0.0 seconds starting phase `patch-generated-file-shebangs' phase `patch-generated-file-shebangs' succeeded after 0.0 seconds starting phase `install' * installing *source* package ‘stringdist’ ... ** package ‘stringdist’ successfully unpacked and MD5 sums checked ** using staged installation ** libs gcc -I"/gnu/store/gd6sm42b6fr1qgyp6p1zp3z4aavxwyk2-r-minimal-3.6.1/lib/R/include" -DNDEBUG -I../inst/include -I/usr/local/include -fopenmp -fpic -g -O2 -c R_register_native.c -o R_register_native.o gcc -I"/gnu/store/gd6sm42b6fr1qgyp6p1zp3z4aavxwyk2-r-minimal-3.6.1/lib/R/include" -DNDEBUG -I../inst/include -I/usr/local/include -fopenmp -fpic -g -O2 -c Rstringdist.c -o Rstringdist.o gcc -I"/gnu/store/gd6sm42b6fr1qgyp6p1zp3z4aavxwyk2-r-minimal-3.6.1/lib/R/include" -DNDEBUG -I../inst/include -I/usr/local/include -fopenmp -fpic -g -O2 -c dl.c -o dl.o gcc -I"/gnu/store/gd6sm42b6fr1qgyp6p1zp3z4aavxwyk2-r-minimal-3.6.1/lib/R/include" -DNDEBUG -I../inst/include -I/usr/local/include -fopenmp -fpic -g -O2 -c hamming.c -o hamming.o gcc -I"/gnu/store/gd6sm42b6fr1qgyp6p1zp3z4aavxwyk2-r-minimal-3.6.1/lib/R/include" -DNDEBUG -I../inst/include -I/usr/local/include -fopenmp -fpic -g -O2 -c jaro.c -o jaro.o gcc -I"/gnu/store/gd6sm42b6fr1qgyp6p1zp3z4aavxwyk2-r-minimal-3.6.1/lib/R/include" -DNDEBUG -I../inst/include -I/usr/local/include -fopenmp -fpic -g -O2 -c lcs.c -o lcs.o gcc -I"/gnu/store/gd6sm42b6fr1qgyp6p1zp3z4aavxwyk2-r-minimal-3.6.1/lib/R/include" -DNDEBUG -I../inst/include -I/usr/local/include -fopenmp -fpic -g -O2 -c lv.c -o lv.o gcc -I"/gnu/store/gd6sm42b6fr1qgyp6p1zp3z4aavxwyk2-r-minimal-3.6.1/lib/R/include" -DNDEBUG -I../inst/include -I/usr/local/include -fopenmp -fpic -g -O2 -c osa.c -o osa.o gcc -I"/gnu/store/gd6sm42b6fr1qgyp6p1zp3z4aavxwyk2-r-minimal-3.6.1/lib/R/include" -DNDEBUG -I../inst/include -I/usr/local/include -fopenmp -fpic -g -O2 -c qgram.c -o qgram.o gcc -I"/gnu/store/gd6sm42b6fr1qgyp6p1zp3z4aavxwyk2-r-minimal-3.6.1/lib/R/include" -DNDEBUG -I../inst/include -I/usr/local/include -fopenmp -fpic -g -O2 -c soundex.c -o soundex.o gcc -I"/gnu/store/gd6sm42b6fr1qgyp6p1zp3z4aavxwyk2-r-minimal-3.6.1/lib/R/include" -DNDEBUG -I../inst/include -I/usr/local/include -fopenmp -fpic -g -O2 -c stringdist.c -o stringdist.o gcc -I"/gnu/store/gd6sm42b6fr1qgyp6p1zp3z4aavxwyk2-r-minimal-3.6.1/lib/R/include" -DNDEBUG -I../inst/include -I/usr/local/include -fopenmp -fpic -g -O2 -c utf8ToInt.c -o